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  "Package": "Hmsc",
  "Title": "Hierarchical Model of Species Communities",
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  "Author": "Gleb Tikhonov [aut], Otso Ovaskainen [aut, cre]\n(<https://orcid.org/0000-0001-9750-4421>), Jari Oksanen [aut],\nMelinda de Jonge [aut], Oystein Opedal [aut], Tad Dallas [aut]",
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  "Description": "Hierarchical Modelling of Species Communities (HMSC) is a\nmodel-based approach for analyzing community ecological data.\nThis package implements it in the Bayesian framework with Gibbs\nMarkov chain Monte Carlo (MCMC) sampling (Tikhonov et al.\n(2020) <doi:10.1111/2041-210X.13345>).",
  "License": "GPL-3 | file LICENSE",
  "URL": "https://www.helsinki.fi/en/researchgroups/statistical-ecology/software/hmsc",
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    "computeWAIC",
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    "coralGetRareSpeciesPriors",
    "coralGetXDataExt",
    "coralPlotBeta",
    "coralPredict",
    "coralPreprocess",
    "coralSplitToBatches",
    "coralTrain",
    "createPartition",
    "evaluateModelFit",
    "getPostEstimate",
    "Hmsc",
    "HmscRandomLevel",
    "importPosteriorFromHPC",
    "pcomputePredictedValues",
    "plotBeta",
    "plotGamma",
    "plotGradient",
    "plotVariancePartitioning",
    "poolMcmcChains",
    "predictLatentFactor",
    "prepareGradient",
    "sampleMcmc",
    "setPriors",
    "taxToPhylo"
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      "title": "Simulated data and a fitted Hmsc model for a small species community.",
      "object": "TD",
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      ],
      "fields": [],
      "table": false,
      "tojson": false
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      "title": "alignPosterior",
      "topics": [
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      "title": "Combine Posterior Samples of Several Hmsc Models",
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      "title": "Convert Taxonomy to Phylogenetic Tree",
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