Package: Hmsc
Title: Hierarchical Model of Species Communities
Type: Package
Version: 3.4-1
Author: Gleb Tikhonov [aut], Otso Ovaskainen [aut, cre]
        (<https://orcid.org/0000-0001-9750-4421>), Jari Oksanen [aut],
        Melinda de Jonge [aut], Oystein Opedal [aut], Tad Dallas [aut]
Maintainer: Otso Ovaskainen <otso.t.ovaskainen@jyu.fi>
Authors@R: c(person(given = "Gleb", family="Tikhonov", role="aut"),
   person(given="Otso", family="Ovaskainen",
      email="otso.t.ovaskainen@jyu.fi",
      comment = c(ORCID="0000-0001-9750-4421"), role=c("aut", "cre")),
   person(given="Jari", family="Oksanen", role=c("aut"),
   email="jhoksane@gmail.com"),
   person(given="Melinda", family=c("de", "Jonge"), role="ctb"),
   person(given="Oystein", family="Opedal", role="ctb"),
   person(given="Tad", family="Dallas", role="ctb"),
   person(given="Tuomas", family="Rossi", role="ctb"))
Description: Hierarchical Modelling of Species Communities (HMSC) is a
        model-based approach for analyzing community ecological data.
        This package implements it in the Bayesian framework with Gibbs
        Markov chain Monte Carlo (MCMC) sampling (Tikhonov et al.
        (2020) <doi:10.1111/2041-210X.13345>).
License: GPL-3 | file LICENSE
URL:
        https://www.helsinki.fi/en/researchgroups/statistical-ecology/software/hmsc
BugReports: https://github.com/hmsc-r/HMSC/issues/
Encoding: UTF-8
LazyData: true
Suggests: R.rsp, testthat, corrplot
VignetteBuilder: R.rsp
Depends: R (>= 3.0.2), coda
Imports: abind, ape, BayesLogit, fields, FNN, ggplot2, MASS, Matrix,
        matrixStats, MCMCpack, methods, nnet, rlang, parallel, pracma,
        pROC, sp, statmod, truncnorm
Config/roxygen2/version: 8.0.0
Repository: https://hmsc-r.r-universe.dev
Date/Publication: 2026-06-26 15:45:42 UTC
RemoteUrl: https://github.com/hmsc-r/hmsc
RemoteRef: HEAD
RemoteSha: 7dd2926f877d93e113bbf83352b50c409a67ef0f
NeedsCompilation: no
Packaged: 2026-06-26 16:52:32 UTC; root